Wei Ye

Publications (9)

Publications listed in the lab bibliography, across all years.

2017

Wei Ye, Tianle Qian, Hao Liu, Ray Luo, Hai-Feng Chen (2017). Allosteric Autoinhibition Pathway in Transcription Factor ERG: Dynamics Network and Mutant Experimental Evaluations. Journal of Chemical Information and Modeling.

2016

Jinmai Zhang, Huajie Luo, Hao Liu, Wei Ye, Ray Luo, Hai-Feng Chen (2016). Synergistic Modification Induced Specific Recognition between Histone and TRIM24 via Fluctuation Correlation Network Analysis. Scientific Reports.

Wei Wang, Cheng Jiang, Jinmai Zhang, Wei Ye, Ray Luo, Hai-Feng Chen (2016). Dynamics Correlation Network for Allosteric Switching of PreQ1 Riboswitch. Scientific Reports.

Jin-Mai Zhang, Cheng Jiang, Wei Ye, Ray Luo, Hai-Feng Chen (2016). Allosteric pathways in tetrahydrofolate sensing riboswitch with dynamics correlation network. Molecular BioSystems.

Dong Song, Wei Wang, Wei Ye, Dingjue Ji, Ray Luo, Hai‐Feng Chen (2016). <i>ff14IDPs</i> force field improving the conformation sampling of intrinsically disordered proteins. Chemical Biology & Drug Design.

2015

Wei Ye, Dingjue Ji, Wei Wang, Ray Luo, Hai-Feng Chen (2015). Test and Evaluation of <i>ff99IDPs</i> Force Field for Intrinsically Disordered Proteins. Journal of Chemical Information and Modeling.

Lishi Xu, Wei Ye, Cheng Jiang, Jingxu Yang, Jinmai Zhang, Yan Feng, Ray Luo, Hai-Feng Chen (2015). Recognition Mechanism between Lac Repressor and DNA with Correlation Network Analysis. The Journal of Physical Chemistry B.

2013

Wei Wang, Wei Ye, Qingfen Yu, Cheng Jiang, Jian Zhang, Ray Luo, Hai-Feng Chen (2013). Conformational Selection and Induced Fit in Specific Antibody and Antigen Recognition: SPE7 as a Case Study. The Journal of Physical Chemistry B.

2012

Wei Ye, Fang Qin, Jian Zhang, Ray Luo, Hai-Feng Chen (2012). Atomistic Mechanism of MicroRNA Translation Upregulation via Molecular Dynamics Simulations. PLoS ONE.