Ray Luo Lab
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A point‐charge force field for molecular mechanics simulations of proteins based on condensed‐phase quantum mechanical calculations
Yong Duan
,
Chun Wu
,
Shibasish Chowdhury
,
Mathew C. Lee
,
Guoming Xiong
,
Wei Zhang
,
Rong Yang
,
Piotr Cieplak
,
Ray Luo
,
Taisung Lee
,
James Caldwell
,
Junmei Wang
,
Peter Kollman
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DOI
A Poisson–Boltzmann dynamics method with nonperiodic boundary condition
Qiang Lu
,
Ray Luo
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DOI
From 1D to 3D: Cooperative Determination of a Protein’s Structure from its Sequence
Ray Luo
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Accelerated Poisson–Boltzmann calculations for static and dynamic systems
Ray Luo
,
Laurent David
,
Michael K. Gilson
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DOI
An Analysis of the Interactions between the Sem−5 SH3 Domain and Its Ligands Using Molecular Dynamics, Free Energy Calculations, and Sequence Analysis
Wei Wang
,
Wendell A. Lim
,
Araz Jakalian
,
Jian Wang
,
Junmei Wang
,
Ray Luo
,
Christopher I. Bayly
,
Peter A. Kollman
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DOI
Interpreting trends in the binding of cyclic ureas to HIV-1 protease
Kristy L. Mardis
,
Ray Luo
,
Michael K. Gilson
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DOI
Ligand-receptor docking with the Mining Minima optimizer
Laurent David
,
Ray Luo
,
Michael K. Gilson
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DOI
The Physical Basis of Nucleic Acid Base Stacking in Water
Ray Luo
,
Hillary S. R. Gilson
,
Michael J. Potter
,
Michael K. Gilson
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DOI
Comparison of generalized born and poisson models: Energetics and dynamics of HIV protease
Laurent David
,
Ray Luo
,
Michael K. Gilson
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DOI
Modeling Molecular Recognition: Theory and Application
Kristy Mardis
,
Ray Luo
,
Laurent David
,
Michael Potter
,
Amy Glemza
,
Greg Payne
,
Michael K. Gilson
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DOI
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