Article-Journal

From 1D to 3D: Cooperative Determination of a Protein’s Structure from its Sequence
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Accelerated Poisson–Boltzmann calculations for static and dynamic systems
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An Analysis of the Interactions between the Sem−5 SH3 Domain and Its Ligands Using Molecular Dynamics, Free Energy Calculations, and Sequence Analysis
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Interpreting trends in the binding of cyclic ureas to HIV-1 protease
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Ligand-receptor docking with the Mining Minima optimizer
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The Physical Basis of Nucleic Acid Base Stacking in Water
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Comparison of generalized born and poisson models: Energetics and dynamics of HIV protease
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Modeling Molecular Recognition: Theory and Application
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Synthetic Adenine Receptors:  Direct Calculation of Binding Affinity and Entropy
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Calculation of the binding affinity of phenylalanine to beta-cyclodextrin
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